Open Materials & Interactive Figures

Note: Functionality of online executable Jupyter Notebooks depends on the availibility of computational resources generously allocated by HHMI Janelia Research Center on Google Compute Engine. To find out more about this service, please visit BinderHub.

Most of the interactive figures provided in this platform are hosted on Plotly.

Ex-vivo Pig Hearts
Comparing cardiac T1 mapping techniques

- Execute Jupyter Notebook online by clicking the badge below.

- Click here to access interactive figures right away.

Dataset belonging to this study is publicly available here under the CC BY 4.0 license.

OSF Identifiers

• DOI 10.17605/OSF.IO/KEPSA
• ARK c7605/osf.io/kepsa

Ex-vivo Canine Spinal Cord
Evaluating the relaibility of myelin imaging

- Explore the analysis results by regenerating interactive figures on Jupyter Notebook:

Quantitative MRI analyses are powered by qMRLab.

Dataset belonging to this study is publicly available here under the CC BY 4.0 license.

OSF Identifiers

• DOI 10.17605/OSF.IO/GBN6R

Science Communication

2018

• The Problem, Blog post in qMRLab web portal
• Hello World!, Blog post in qMRLab web portal
• Every MR Image is a symphony, every qMRI map is an instrument, Blog post about my award winning public engagement video in qMRLab web portal
• qMRLab in a Jupyter Notebook: A tutorial for Win10 users, Tutorial in qMRLab web portal

2017

• Open science topic: Neurodebian, Interview with Yaroslav Halchenko and Michael Hanke in OHBM Blog
• OHBM Hackathon 2017: A first timer’s perspective, Blog post in OHBM Blog
• Q&A with Davide Piccini and Matthias Stuber, Interview in MRM Highlights